Package: CMplot 4.5.1

CMplot: Circle Manhattan Plot

Manhattan plot, a type of scatter plot, was widely used to display the association results. However, it is usually time-consuming and laborious for a non-specialist user to write scripts and adjust parameters of an elaborate plot. Moreover, the ever-growing traits measured have necessitated the integration of results from different Genome-wide association study researches. Circle Manhattan Plot is the first open R package that can lay out. Genome-wide association study P-value results in both traditional rectangular patterns, QQ-plot and novel circular ones. United in only one bull's eye style plot, association results from multiple traits can be compared interactively, thereby to reveal both similarities and differences between signals. Additional functions include: highlight signals, a group of SNPs, chromosome visualization and candidate genes around SNPs.

Authors:LiLin-Yin

CMplot_4.5.1.tar.gz
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CMplot.pdf |CMplot.html
CMplot/json (API)

# Install 'CMplot' in R:
install.packages('CMplot', repos = c('https://yinlilin.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/yinlilin/cmplot/issues

Datasets:

On CRAN:

4.87 score 2 packages 224 scripts 2.8k downloads 76 mentions 1 exports 0 dependencies

Last updated 10 months agofrom:b87a45d9c3. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 15 2024
R-4.5-winOKNov 15 2024
R-4.5-linuxOKNov 15 2024
R-4.4-winOKNov 15 2024
R-4.4-macOKNov 15 2024
R-4.3-winOKNov 15 2024
R-4.3-macOKNov 15 2024

Exports:CMplot

Dependencies: